add_atom(double x, double y, double z, double q, int atn) | madness::Molecule | |
atomic_radii | madness::Molecule | |
bounding_cube() const | madness::Molecule | |
center() | madness::Molecule | |
core_derivative(int atom, int axis, unsigned int core, int m, double x, double y, double z) const | madness::Molecule | |
core_eval(int atom, unsigned int core, int m, double x, double y, double z) const | madness::Molecule | |
core_potential_derivative(int atom, int axis, double x, double y, double z) const | madness::Molecule | |
get_all_coords() const | madness::Molecule | |
get_all_coords_vec() const | madness::Molecule | |
get_atom(unsigned int i) const | madness::Molecule | |
get_atom_number(unsigned int i) | madness::Molecule | |
get_core_bc(unsigned int atn, unsigned int c) const | madness::Molecule | inline |
get_core_l(unsigned int atn, unsigned int c) const | madness::Molecule | inline |
get_eprec() const | madness::Molecule | inline |
guess_file() const | madness::Molecule | inline |
identify_point_group() | madness::Molecule | |
inter_atomic_distance(unsigned int i, unsigned int j) const | madness::Molecule | |
is_potential_defined(unsigned int atn) const | madness::Molecule | inline |
is_potential_defined_atom(int i) const | madness::Molecule | inline |
mol_nuclear_charge_density(double x, double y, double z) const | madness::Molecule | |
molecular_core_potential(double x, double y, double z) const | madness::Molecule | |
Molecule() | madness::Molecule | inline |
Molecule(const std::string &filename) | madness::Molecule | |
n_core_orb(unsigned int atn) const | madness::Molecule | inline |
n_core_orb_all() const | madness::Molecule | |
natom() const | madness::Molecule | inline |
nuclear_attraction_potential(double x, double y, double z) const | madness::Molecule | |
nuclear_attraction_potential_derivative(int atom, int axis, double x, double y, double z) const | madness::Molecule | |
nuclear_charge_density(double x, double y, double z) const | madness::Molecule | |
nuclear_dipole(int axis) const | madness::Molecule | |
nuclear_repulsion_derivative(int i, int j) const | madness::Molecule | |
nuclear_repulsion_energy() const | madness::Molecule | |
nuclear_repulsion_energy_pseudo() const | madness::Molecule | |
orient() | madness::Molecule | |
pointgroup_ | madness::Molecule | |
print() const | madness::Molecule | |
read_core_file(const std::string &filename) | madness::Molecule | |
read_file(const std::string &filename) | madness::Molecule | |
serialize(Archive &ar) | madness::Molecule | inline |
set_all_coords(const madness::Tensor< double > &newcoords) | madness::Molecule | |
set_atom_charge(unsigned int i, double zeff) | madness::Molecule | |
set_atom_coords(unsigned int i, double x, double y, double z) | madness::Molecule | |
set_core_eprec(double value) | madness::Molecule | inline |
set_core_rcut(double value) | madness::Molecule | inline |
set_eprec(double value) | madness::Molecule | |
set_rcut(double value) | madness::Molecule | |
smallest_length_scale() const | madness::Molecule | |
total_nuclear_charge() const | madness::Molecule | |